Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 AC093323.1-202ENST00000635031 2045 ntBASIC21.48■■□□□ 1.03
FOXS1O43638 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXS1O43638 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
FOXS1O43638 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXS1O43638 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXS1O43638 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXS1O43638 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.48■■□□□ 1.03
FOXS1O43638 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
FOXS1O43638 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FOXS1O43638 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXS1O43638 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXS1O43638 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXS1O43638 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.47■■□□□ 1.03
FOXS1O43638 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXS1O43638 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXS1O43638 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
FOXS1O43638 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXS1O43638 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXS1O43638 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXS1O43638 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXS1O43638 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXS1O43638 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXS1O43638 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXS1O43638 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXS1O43638 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXS1O43638 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
FOXS1O43638 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXS1O43638 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXS1O43638 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXS1O43638 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
FOXS1O43638 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXS1O43638 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXS1O43638 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXS1O43638 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXS1O43638 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXS1O43638 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXS1O43638 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXS1O43638 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FOXS1O43638 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FOXS1O43638 ABCB10P4-201ENST00000566803 2184 ntBASIC21.44■■□□□ 1.02
FOXS1O43638 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXS1O43638 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXS1O43638 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXS1O43638 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXS1O43638 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXS1O43638 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXS1O43638 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXS1O43638 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXS1O43638 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.43■■□□□ 1.02
FOXS1O43638 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXS1O43638 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXS1O43638 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXS1O43638 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXS1O43638 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXS1O43638 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXS1O43638 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXS1O43638 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
FOXS1O43638 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXS1O43638 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXS1O43638 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXS1O43638 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXS1O43638 C17orf82-201ENST00000623772 1530 ntBASIC21.41■■□□□ 1.02
FOXS1O43638 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
FOXS1O43638 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXS1O43638 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXS1O43638 SRD5A1P1-201ENST00000442297 786 ntBASIC21.41■■□□□ 1.02
FOXS1O43638 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXS1O43638 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXS1O43638 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXS1O43638 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXS1O43638 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXS1O43638 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXS1O43638 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
FOXS1O43638 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXS1O43638 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXS1O43638 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXS1O43638 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXS1O43638 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
FOXS1O43638 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXS1O43638 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXS1O43638 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXS1O43638 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.39■■□□□ 1.01
FOXS1O43638 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXS1O43638 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXS1O43638 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXS1O43638 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXS1O43638 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXS1O43638 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
FOXS1O43638 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXS1O43638 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
FOXS1O43638 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXS1O43638 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.38■■□□□ 1.01
FOXS1O43638 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXS1O43638 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
FOXS1O43638 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXS1O43638 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXS1O43638 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXS1O43638 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
FOXS1O43638 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXS1O43638 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms