Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PAX4O43316 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.11■□□□□ 0.17
PAX4O43316 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.11■□□□□ 0.17
PAX4O43316 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.1■□□□□ 0.17
PAX4O43316 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.1■□□□□ 0.17
PAX4O43316 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.1■□□□□ 0.17
PAX4O43316 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PAX4O43316 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PAX4O43316 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PAX4O43316 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 AC021242.3-201ENST00000607598 1377 ntBASIC16.1■□□□□ 0.17
PAX4O43316 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PAX4O43316 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PAX4O43316 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PAX4O43316 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PAX4O43316 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PAX4O43316 AC004448.1-201ENST00000458332 883 ntBASIC16.09■□□□□ 0.17
PAX4O43316 MIR4787-201ENST00000607364 84 ntBASIC16.09■□□□□ 0.17
PAX4O43316 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PAX4O43316 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PAX4O43316 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PAX4O43316 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PAX4O43316 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.08■□□□□ 0.17
PAX4O43316 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PAX4O43316 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PAX4O43316 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PAX4O43316 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.08■□□□□ 0.17
PAX4O43316 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PAX4O43316 AC004812.2-201ENST00000611079 2094 ntBASIC16.08■□□□□ 0.16
PAX4O43316 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.08■□□□□ 0.16
PAX4O43316 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PAX4O43316 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PAX4O43316 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PAX4O43316 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.08■□□□□ 0.16
PAX4O43316 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PAX4O43316 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.07■□□□□ 0.16
PAX4O43316 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PAX4O43316 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.07■□□□□ 0.16
PAX4O43316 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.07■□□□□ 0.16
PAX4O43316 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PAX4O43316 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PAX4O43316 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PAX4O43316 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PAX4O43316 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PAX4O43316 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PAX4O43316 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PAX4O43316 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PAX4O43316 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PAX4O43316 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PAX4O43316 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PAX4O43316 AC092028.1-203ENST00000608262 953 ntBASIC16.06■□□□□ 0.16
PAX4O43316 AL035685.1-201ENST00000636663 812 ntBASIC16.06■□□□□ 0.16
PAX4O43316 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PAX4O43316 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
PAX4O43316 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.06■□□□□ 0.16
PAX4O43316 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PAX4O43316 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.06■□□□□ 0.16
PAX4O43316 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PAX4O43316 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 ABCB10P4-201ENST00000566803 2184 ntBASIC16.05■□□□□ 0.16
PAX4O43316 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.05■□□□□ 0.16
PAX4O43316 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX4O43316 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.05■□□□□ 0.16
PAX4O43316 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX4O43316 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.05■□□□□ 0.16
PAX4O43316 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX4O43316 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX4O43316 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PAX4O43316 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.05■□□□□ 0.16
PAX4O43316 SNX5-217ENST00000606557 1087 ntBASIC16.05■□□□□ 0.16
PAX4O43316 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.05■□□□□ 0.16
PAX4O43316 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
PAX4O43316 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.05■□□□□ 0.16
PAX4O43316 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PAX4O43316 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PAX4O43316 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PAX4O43316 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms