Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AL022069.1-201ENST00000568025 1636 ntBASIC20.95■□□□□ 0.94
TNFRSF11BO00300 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 GUSBP5-202ENST00000510805 1989 ntBASIC20.95■□□□□ 0.94
TNFRSF11BO00300 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF11BO00300 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF11BO00300 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF11BO00300 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
TNFRSF11BO00300 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF11BO00300 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 AC087393.1-201ENST00000582896 145 ntBASIC20.91■□□□□ 0.94
TNFRSF11BO00300 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF11BO00300 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TNFRSF11BO00300 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TNFRSF11BO00300 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TNFRSF11BO00300 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.89■□□□□ 0.94
TNFRSF11BO00300 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TNFRSF11BO00300 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF11BO00300 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF11BO00300 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFRSF11BO00300 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFRSF11BO00300 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF11BO00300 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF11BO00300 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 SPCS2P3-201ENST00000500401 656 ntBASIC20.88■□□□□ 0.93
TNFRSF11BO00300 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF11BO00300 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 ECEL1P1-201ENST00000373592 1742 ntBASIC20.87■□□□□ 0.93
TNFRSF11BO00300 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms