Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF223E7ERA6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF223E7ERA6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RNF223E7ERA6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF223E7ERA6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF223E7ERA6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF223E7ERA6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF223E7ERA6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF223E7ERA6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF223E7ERA6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF223E7ERA6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF223E7ERA6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF223E7ERA6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF223E7ERA6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF223E7ERA6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF223E7ERA6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF223E7ERA6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF223E7ERA6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF223E7ERA6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF223E7ERA6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
RNF223E7ERA6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF223E7ERA6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF223E7ERA6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF223E7ERA6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
RNF223E7ERA6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF223E7ERA6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF223E7ERA6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF223E7ERA6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF223E7ERA6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
RNF223E7ERA6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF223E7ERA6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF223E7ERA6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF223E7ERA6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RNF223E7ERA6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF223E7ERA6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF223E7ERA6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF223E7ERA6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
RNF223E7ERA6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF223E7ERA6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF223E7ERA6 SLC47A1P1-202ENST00000449666 945 ntBASIC18.88■□□□□ 0.61
RNF223E7ERA6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF223E7ERA6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF223E7ERA6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF223E7ERA6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF223E7ERA6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF223E7ERA6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF223E7ERA6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF223E7ERA6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF223E7ERA6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF223E7ERA6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF223E7ERA6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF223E7ERA6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF223E7ERA6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
RNF223E7ERA6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4L2-201ENST00000561772 1275 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
RNF223E7ERA6 MIR6089-201ENST00000616698 64 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4L6-201ENST00000626483 1275 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4L1-201ENST00000627662 1275 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4L8-201ENST00000629013 1275 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4L3-201ENST00000630187 1275 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4L7-201ENST00000630678 1275 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 DUX4L5-201ENST00000630834 1275 ntBASIC18.87■□□□□ 0.61
RNF223E7ERA6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF223E7ERA6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF223E7ERA6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF223E7ERA6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF223E7ERA6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF223E7ERA6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF223E7ERA6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF223E7ERA6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF223E7ERA6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF223E7ERA6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF223E7ERA6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF223E7ERA6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF223E7ERA6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF223E7ERA6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RNF223E7ERA6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF223E7ERA6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 AC004911.1-201ENST00000416316 871 ntBASIC18.85■□□□□ 0.61
RNF223E7ERA6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF223E7ERA6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF223E7ERA6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF223E7ERA6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF223E7ERA6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF223E7ERA6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF223E7ERA6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF223E7ERA6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF223E7ERA6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF223E7ERA6 AL358852.1-201ENST00000623174 1268 ntBASIC18.84■□□□□ 0.61
RNF223E7ERA6 AC092437.1-201ENST00000624794 1048 ntBASIC18.84■□□□□ 0.61
RNF223E7ERA6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms