Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TMEM88BA6NKF7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
TMEM88BA6NKF7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM88BA6NKF7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
TMEM88BA6NKF7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.92■■□□□ 1.9
TMEM88BA6NKF7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TMEM88BA6NKF7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.91■■□□□ 1.9
TMEM88BA6NKF7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.91■■□□□ 1.9
TMEM88BA6NKF7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.91■■□□□ 1.9
TMEM88BA6NKF7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.91■■□□□ 1.9
TMEM88BA6NKF7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TMEM88BA6NKF7 BID-214ENST00000617586 542 ntTSL 5 BASIC26.91■■□□□ 1.9
TMEM88BA6NKF7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
TMEM88BA6NKF7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 KRT18P61-201ENST00000585825 1298 ntBASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TMEM88BA6NKF7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
TMEM88BA6NKF7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TMEM88BA6NKF7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TMEM88BA6NKF7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
TMEM88BA6NKF7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
TMEM88BA6NKF7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TMEM88BA6NKF7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
TMEM88BA6NKF7 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.86■■□□□ 1.89
TMEM88BA6NKF7 AP005435.1-201ENST00000529293 1178 ntBASIC26.86■■□□□ 1.89
TMEM88BA6NKF7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TMEM88BA6NKF7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.86■■□□□ 1.89
TMEM88BA6NKF7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.85■■□□□ 1.89
TMEM88BA6NKF7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.85■■□□□ 1.89
TMEM88BA6NKF7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
TMEM88BA6NKF7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.85■■□□□ 1.89
TMEM88BA6NKF7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 GPX1P1-201ENST00000388829 606 ntBASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
TMEM88BA6NKF7 AC097639.1-201ENST00000565519 1891 ntBASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 AC093827.2-201ENST00000512654 315 ntBASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TMEM88BA6NKF7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
TMEM88BA6NKF7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.82■■□□□ 1.88
TMEM88BA6NKF7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TMEM88BA6NKF7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TMEM88BA6NKF7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
TMEM88BA6NKF7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.82■■□□□ 1.88
TMEM88BA6NKF7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TMEM88BA6NKF7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms