Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TMEM235A6NFC5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM235A6NFC5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM235A6NFC5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM235A6NFC5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM235A6NFC5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM235A6NFC5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 ECEL1P1-201ENST00000373592 1742 ntBASIC19.29■□□□□ 0.68
TMEM235A6NFC5 MIR639-201ENST00000384974 98 ntBASIC19.29■□□□□ 0.68
TMEM235A6NFC5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM235A6NFC5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 AC127496.7-201ENST00000625110 1798 ntBASIC19.28■□□□□ 0.68
TMEM235A6NFC5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM235A6NFC5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM235A6NFC5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM235A6NFC5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
TMEM235A6NFC5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM235A6NFC5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 AC009831.1-201ENST00000580420 1582 ntBASIC19.26■□□□□ 0.67
TMEM235A6NFC5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM235A6NFC5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM235A6NFC5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms