Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 AC009086.3-201ENST00000623486 1008 ntBASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3L4A6NDZ8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 AC091305.1-201ENST00000479476 895 ntBASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD3L4A6NDZ8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 AC135731.1-201ENST00000569415 2548 ntBASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 AC006455.2-201ENST00000429931 906 ntBASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.09■□□□□ 0.81
MBD3L4A6NDZ8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 AC136469.2-201ENST00000623944 1028 ntBASIC20.08■□□□□ 0.81
MBD3L4A6NDZ8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MBD3L4A6NDZ8 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 AC027682.1-201ENST00000562846 899 ntBASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MBD3L4A6NDZ8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 AC105265.2-201ENST00000467189 838 ntBASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 MIR3181-201ENST00000578512 73 ntBASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
MBD3L4A6NDZ8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 RASA4CP-201ENST00000424092 1398 ntBASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MBD3L4A6NDZ8 AC141586.4-201ENST00000624558 1573 ntBASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MBD3L4A6NDZ8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 AC020928.2-201ENST00000588717 2197 ntBASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 CA15P2-201ENST00000611168 834 ntBASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MBD3L4A6NDZ8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms