Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 AC092053.2-201ENST00000640557 1818 ntBASIC18.5■□□□□ 0.55
RNF222A6NCQ9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF222A6NCQ9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF222A6NCQ9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF222A6NCQ9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF222A6NCQ9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF222A6NCQ9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF222A6NCQ9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.48■□□□□ 0.55
RNF222A6NCQ9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF222A6NCQ9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RNF222A6NCQ9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 AC092667.1-201ENST00000434301 2586 ntBASIC18.46■□□□□ 0.55
RNF222A6NCQ9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 AC008813.1-201ENST00000536597 885 ntBASIC18.46■□□□□ 0.55
RNF222A6NCQ9 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF222A6NCQ9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.46■□□□□ 0.54
RNF222A6NCQ9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 MIR3665-201ENST00000578708 105 ntBASIC18.45■□□□□ 0.54
RNF222A6NCQ9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF222A6NCQ9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF222A6NCQ9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF222A6NCQ9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF222A6NCQ9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms