Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR3EA5X5Y0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HTR3EA5X5Y0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HTR3EA5X5Y0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.85■□□□□ 0.93
HTR3EA5X5Y0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 AL117328.2-201ENST00000624617 1940 ntBASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 AL022069.1-201ENST00000568025 1636 ntBASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3EA5X5Y0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 NTF6A-201ENST00000591175 560 ntBASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.83■□□□□ 0.93
HTR3EA5X5Y0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.83■□□□□ 0.92
HTR3EA5X5Y0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3EA5X5Y0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 AC139795.1-202ENST00000500444 432 ntBASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.81■□□□□ 0.92
HTR3EA5X5Y0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3EA5X5Y0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3EA5X5Y0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3EA5X5Y0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.8■□□□□ 0.92
HTR3EA5X5Y0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3EA5X5Y0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3EA5X5Y0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.79■□□□□ 0.92
HTR3EA5X5Y0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
HTR3EA5X5Y0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3EA5X5Y0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms