Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC33.94■■■■□ 3.02
HFM1A2PYH4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC33.94■■■■□ 3.02
HFM1A2PYH4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
HFM1A2PYH4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC33.93■■■■□ 3.02
HFM1A2PYH4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
HFM1A2PYH4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC33.93■■■■□ 3.02
HFM1A2PYH4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
HFM1A2PYH4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
HFM1A2PYH4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC33.92■■■■□ 3.02
HFM1A2PYH4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC33.92■■■■□ 3.02
HFM1A2PYH4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC33.92■■■■□ 3.02
HFM1A2PYH4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
HFM1A2PYH4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
HFM1A2PYH4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
HFM1A2PYH4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
HFM1A2PYH4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC33.92■■■■□ 3.02
HFM1A2PYH4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC33.92■■■■□ 3.02
HFM1A2PYH4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
HFM1A2PYH4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC33.91■■■■□ 3.02
HFM1A2PYH4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC33.91■■■■□ 3.02
HFM1A2PYH4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC33.91■■■■□ 3.02
HFM1A2PYH4 AL139246.5-201ENST00000606645 996 ntBASIC33.91■■■■□ 3.02
HFM1A2PYH4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC33.91■■■■□ 3.02
HFM1A2PYH4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
HFM1A2PYH4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC33.91■■■■□ 3.02
HFM1A2PYH4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
HFM1A2PYH4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC33.9■■■■□ 3.02
HFM1A2PYH4 AC096631.2-201ENST00000436136 790 ntBASIC33.9■■■■□ 3.02
HFM1A2PYH4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC33.9■■■■□ 3.02
HFM1A2PYH4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC33.9■■■■□ 3.02
HFM1A2PYH4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
HFM1A2PYH4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC33.89■■■■□ 3.02
HFM1A2PYH4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
HFM1A2PYH4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
HFM1A2PYH4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC33.88■■■■□ 3.01
HFM1A2PYH4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC33.88■■■■□ 3.01
HFM1A2PYH4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
HFM1A2PYH4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC33.87■■■■□ 3.01
HFM1A2PYH4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC33.87■■■■□ 3.01
HFM1A2PYH4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC33.87■■■■□ 3.01
HFM1A2PYH4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC33.86■■■■□ 3.01
HFM1A2PYH4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC33.86■■■■□ 3.01
HFM1A2PYH4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
HFM1A2PYH4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
HFM1A2PYH4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
HFM1A2PYH4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
HFM1A2PYH4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
HFM1A2PYH4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
HFM1A2PYH4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC33.84■■■■□ 3.01
HFM1A2PYH4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC33.84■■■■□ 3.01
HFM1A2PYH4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
HFM1A2PYH4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC33.83■■■■□ 3.01
HFM1A2PYH4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC33.83■■■■□ 3.01
HFM1A2PYH4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC33.83■■■■□ 3.01
HFM1A2PYH4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
HFM1A2PYH4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC33.83■■■■□ 3.01
HFM1A2PYH4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
HFM1A2PYH4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC33.82■■■■□ 3
HFM1A2PYH4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3
HFM1A2PYH4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC33.82■■■■□ 3
HFM1A2PYH4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC33.82■■■■□ 3
HFM1A2PYH4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC33.81■■■■□ 3
HFM1A2PYH4 SF1-220ENST00000626028 704 ntTSL 2 BASIC33.81■■■■□ 3
HFM1A2PYH4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
HFM1A2PYH4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC33.8■■■■□ 3
HFM1A2PYH4 AC006455.2-201ENST00000429931 906 ntBASIC33.8■■■■□ 3
HFM1A2PYH4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC33.8■■■■□ 3
HFM1A2PYH4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
HFM1A2PYH4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC33.8■■■■□ 3
HFM1A2PYH4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
HFM1A2PYH4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC33.79■■■■□ 3
HFM1A2PYH4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC33.79■■■■□ 3
HFM1A2PYH4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC33.79■■■■□ 3
HFM1A2PYH4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC33.79■■■■□ 3
HFM1A2PYH4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC33.79■■■■□ 3
HFM1A2PYH4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC33.79■■■■□ 3
HFM1A2PYH4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
HFM1A2PYH4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
HFM1A2PYH4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC33.79■■■■□ 3
HFM1A2PYH4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC33.79■■■■□ 3
HFM1A2PYH4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC33.79■■■■□ 3
HFM1A2PYH4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
HFM1A2PYH4 AC099791.2-201ENST00000605725 427 ntBASIC33.79■■■■□ 3
HFM1A2PYH4 AC106739.1-201ENST00000617035 715 ntBASIC33.79■■■■□ 3
HFM1A2PYH4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC33.78■■■■□ 3
HFM1A2PYH4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC33.78■■■■□ 3
HFM1A2PYH4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC33.78■■■■□ 3
HFM1A2PYH4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC33.78■■■■□ 3
HFM1A2PYH4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
HFM1A2PYH4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC33.78■■■■□ 3
HFM1A2PYH4 AL031432.3-201ENST00000607698 485 ntBASIC33.78■■■■□ 3
HFM1A2PYH4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
HFM1A2PYH4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC33.77■■■■□ 3
HFM1A2PYH4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC33.77■■■■□ 3
HFM1A2PYH4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
HFM1A2PYH4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC33.77■■■■□ 3
HFM1A2PYH4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
HFM1A2PYH4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
HFM1A2PYH4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
HFM1A2PYH4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC33.76■■■■□ 3
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms