Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 ABHD17AP4-201ENST00000411545 909 ntBASIC19.87■□□□□ 0.77
SHISA3A0PJX4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 AC242852.2-201ENST00000615738 1807 ntBASIC19.87■□□□□ 0.77
SHISA3A0PJX4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SHISA3A0PJX4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHISA3A0PJX4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHISA3A0PJX4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHISA3A0PJX4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.85■□□□□ 0.77
SHISA3A0PJX4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHISA3A0PJX4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHISA3A0PJX4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SHISA3A0PJX4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 AC016575.1-201ENST00000607026 382 ntBASIC19.84■□□□□ 0.77
SHISA3A0PJX4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
SHISA3A0PJX4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHISA3A0PJX4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHISA3A0PJX4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHISA3A0PJX4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHISA3A0PJX4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 ECEL1P2-201ENST00000461596 1295 ntBASIC19.82■□□□□ 0.76
SHISA3A0PJX4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 RAP2CP1-202ENST00000605179 643 ntBASIC19.82■□□□□ 0.76
SHISA3A0PJX4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHISA3A0PJX4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.81■□□□□ 0.76
SHISA3A0PJX4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHISA3A0PJX4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.81■□□□□ 0.76
SHISA3A0PJX4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SHISA3A0PJX4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SHISA3A0PJX4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHISA3A0PJX4 AC090877.2-201ENST00000558441 1738 ntBASIC19.81■□□□□ 0.76
SHISA3A0PJX4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.81■□□□□ 0.76
SHISA3A0PJX4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHISA3A0PJX4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 AC026202.3-201ENST00000600805 1127 ntBASIC19.79■□□□□ 0.76
SHISA3A0PJX4 MIR7108-201ENST00000614319 87 ntBASIC19.79■□□□□ 0.76
SHISA3A0PJX4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms