Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
DUXBA0A1W2PPF3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.52■□□□□ 0.55
DUXBA0A1W2PPF3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DUXBA0A1W2PPF3 AL022069.1-201ENST00000568025 1636 ntBASIC18.52■□□□□ 0.55
DUXBA0A1W2PPF3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DUXBA0A1W2PPF3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
DUXBA0A1W2PPF3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
DUXBA0A1W2PPF3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DUXBA0A1W2PPF3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 AL592295.1-201ENST00000400984 884 ntBASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 AC022413.1-201ENST00000624602 984 ntBASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DUXBA0A1W2PPF3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 ABHD17AP4-201ENST00000411545 909 ntBASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.46■□□□□ 0.55
DUXBA0A1W2PPF3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.46■□□□□ 0.54
DUXBA0A1W2PPF3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
DUXBA0A1W2PPF3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.46■□□□□ 0.54
DUXBA0A1W2PPF3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.45■□□□□ 0.54
DUXBA0A1W2PPF3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DUXBA0A1W2PPF3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms