Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.41■■□□□ 1.82
CCDC196A0A1B0GTZ2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CCDC196A0A1B0GTZ2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CCDC196A0A1B0GTZ2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC196A0A1B0GTZ2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC196A0A1B0GTZ2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC196A0A1B0GTZ2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 KRT16P3-201ENST00000439127 1283 ntBASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC196A0A1B0GTZ2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.39■■□□□ 1.81
CCDC196A0A1B0GTZ2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC196A0A1B0GTZ2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 MIR6724-1-201ENST00000616420 92 ntBASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 MIR6724-2-201ENST00000616483 92 ntBASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 MIR6724-4-201ENST00000617390 92 ntBASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 MIR6724-3-201ENST00000622482 92 ntBASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC196A0A1B0GTZ2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC196A0A1B0GTZ2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC196A0A1B0GTZ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC196A0A1B0GTZ2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC196A0A1B0GTZ2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC196A0A1B0GTZ2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CCDC196A0A1B0GTZ2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CCDC196A0A1B0GTZ2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC196A0A1B0GTZ2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
CCDC196A0A1B0GTZ2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC196A0A1B0GTZ2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC196A0A1B0GTZ2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC196A0A1B0GTZ2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC196A0A1B0GTZ2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC196A0A1B0GTZ2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CCDC196A0A1B0GTZ2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CCDC196A0A1B0GTZ2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC196A0A1B0GTZ2 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.3■■□□□ 1.8
CCDC196A0A1B0GTZ2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CCDC196A0A1B0GTZ2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC196A0A1B0GTZ2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.3■■□□□ 1.8
CCDC196A0A1B0GTZ2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms