Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AC133561.1-201ENST00000568600 2415 ntBASIC20.11■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AC021242.3-201ENST00000607598 1377 ntBASIC20.1■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 AL451085.2-201ENST00000605085 799 ntBASIC20.08■□□□□ 0.81
IGKV1D-43A0A0B4J1Z2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.08■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.08■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.07■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 AC068473.5-201ENST00000616428 2072 ntBASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 BX664725.1-201ENST00000438252 379 ntBASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 AC092068.2-201ENST00000590491 1708 ntBASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 AC009299.2-201ENST00000482477 511 ntBASIC20.05■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.04■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.04■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.04■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.03■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.03■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGKV1D-43A0A0B4J1Z2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms