Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 AC074183.2-201ENST00000623112 922 ntBASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 THA1P-201ENST00000590384 1145 ntBASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV27A0A087WT01 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 DUSP8P3-201ENST00000399571 1760 ntBASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV27A0A087WT01 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV27A0A087WT01 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV27A0A087WT01 AF131216.4-201ENST00000638924 1588 ntBASIC20.52■□□□□ 0.88
TRAV27A0A087WT01 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV27A0A087WT01 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV27A0A087WT01 MIR4281-201ENST00000580852 62 ntBASIC20.52■□□□□ 0.88
TRAV27A0A087WT01 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV27A0A087WT01 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV27A0A087WT01 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TRAV27A0A087WT01 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV27A0A087WT01 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV27A0A087WT01 KRT18P24-201ENST00000344739 1156 ntBASIC20.51■□□□□ 0.87
TRAV27A0A087WT01 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV27A0A087WT01 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.51■□□□□ 0.87
TRAV27A0A087WT01 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRAV27A0A087WT01 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV27A0A087WT01 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 AL033527.3-201ENST00000566366 1196 ntBASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 AC012354.3-201ENST00000623734 483 ntBASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV27A0A087WT01 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV27A0A087WT01 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.46■□□□□ 0.87
TRAV27A0A087WT01 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms