Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 KRT18P24-201ENST00000344739 1156 ntBASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 ATP5G2P3-201ENST00000429083 425 ntBASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 ALDH1A3-203ENST00000557963 1670 ntBASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 AC068473.5-201ENST00000616428 2072 ntBASIC17.73■□□□□ 0.43
TRAV30A0A087WSZ9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 THA1P-201ENST00000590384 1145 ntBASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 AC131274.2-201ENST00000580697 1507 ntBASIC17.72■□□□□ 0.43
TRAV30A0A087WSZ9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 ANOS2P-203ENST00000472227 1816 ntBASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 AC004987.1-201ENST00000428627 508 ntBASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 AC120024.1-201ENST00000562672 995 ntBASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 AC092068.2-201ENST00000590491 1708 ntBASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV30A0A087WSZ9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.71■□□□□ 0.42
TRAV30A0A087WSZ9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV30A0A087WSZ9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.71■□□□□ 0.42
TRAV30A0A087WSZ9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 TSPY13P-201ENST00000338964 914 ntBASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV30A0A087WSZ9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV30A0A087WSZ9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV30A0A087WSZ9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV30A0A087WSZ9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms