Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX49Q9Y6V7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 RET-205ENST00000615310 4337 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 AL356585.2-201ENST00000625078 2396 ntBASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 MIR326-201ENST00000362220 95 ntBASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 AC244093.1-201ENST00000610837 814 ntBASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 AC138951.2-201ENST00000623455 1161 ntBASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DDX49Q9Y6V7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 YBX1P6-201ENST00000442962 1002 ntBASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 C2orf69P2-201ENST00000562032 1123 ntBASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 RN7SL560P-201ENST00000577943 264 ntBASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 ECM1P1-201ENST00000604092 1279 ntBASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX49Q9Y6V7 AC131212.3-201ENST00000624087 4219 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms