Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 DUX4L47-201ENST00000566374 394 ntBASIC13.01□□□□□ -0.33
SSR3Q9UNL2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.01□□□□□ -0.33
SSR3Q9UNL2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.01□□□□□ -0.33
SSR3Q9UNL2 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 AC011481.3-201ENST00000623895 5594 ntBASIC13□□□□□ -0.33
SSR3Q9UNL2 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13□□□□□ -0.33
SSR3Q9UNL2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSR3Q9UNL2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13□□□□□ -0.33
SSR3Q9UNL2 MARK2P9-201ENST00000430958 1727 ntBASIC13□□□□□ -0.33
SSR3Q9UNL2 AL138799.1-201ENST00000448213 1675 ntBASIC13□□□□□ -0.33
SSR3Q9UNL2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13□□□□□ -0.33
SSR3Q9UNL2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 ZNF259P1-201ENST00000407656 1365 ntBASIC13□□□□□ -0.33
SSR3Q9UNL2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13□□□□□ -0.33
SSR3Q9UNL2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 AC004832.2-201ENST00000426397 482 ntBASIC13□□□□□ -0.33
SSR3Q9UNL2 RBPMS2P1-201ENST00000437762 623 ntBASIC13□□□□□ -0.33
SSR3Q9UNL2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13□□□□□ -0.33
SSR3Q9UNL2 AC040169.1-201ENST00000565382 521 ntBASIC13□□□□□ -0.33
SSR3Q9UNL2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13□□□□□ -0.33
SSR3Q9UNL2 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSR3Q9UNL2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSR3Q9UNL2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13□□□□□ -0.33
SSR3Q9UNL2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13□□□□□ -0.33
SSR3Q9UNL2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSR3Q9UNL2 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSR3Q9UNL2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSR3Q9UNL2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.99□□□□□ -0.33
SSR3Q9UNL2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
SSR3Q9UNL2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms