Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.45■□□□□ 0.06
CISHQ9NSE2 AC078875.1-201ENST00000431907 724 ntBASIC15.45■□□□□ 0.06
CISHQ9NSE2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 AC022217.1-201ENST00000521069 738 ntBASIC15.45■□□□□ 0.06
CISHQ9NSE2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 AL451050.2-201ENST00000606967 682 ntBASIC15.45■□□□□ 0.06
CISHQ9NSE2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.45■□□□□ 0.06
CISHQ9NSE2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CISHQ9NSE2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 AC009779.1-201ENST00000551138 283 ntBASIC15.44■□□□□ 0.06
CISHQ9NSE2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 AC243960.2-201ENST00000600996 747 ntBASIC15.44■□□□□ 0.06
CISHQ9NSE2 AC090386.2-201ENST00000623010 1039 ntBASIC15.44■□□□□ 0.06
CISHQ9NSE2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CISHQ9NSE2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CISHQ9NSE2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CISHQ9NSE2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CISHQ9NSE2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms