Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AL354702.1-201ENST00000442006 1960 ntBASIC12.49□□□□□ -0.41
GCM1Q9NP62 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 E2F3P2-201ENST00000447755 1422 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AL354877.1-201ENST00000424412 413 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 ACTBP11-201ENST00000436287 1126 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AL035414.1-201ENST00000451327 857 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 PFN1P12-201ENST00000455938 534 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 RN7SL219P-201ENST00000582872 296 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AL096828.3-201ENST00000615354 462 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AC027601.3-201ENST00000622907 509 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 INTS4P1-203ENST00000641008 3683 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 AL390755.1-201ENST00000623716 2027 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
GCM1Q9NP62 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
GCM1Q9NP62 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.48□□□□□ -0.41
GCM1Q9NP62 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AC139712.1-201ENST00000378256 1875 ntBASIC12.47□□□□□ -0.41
GCM1Q9NP62 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms