Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 AC027237.1-201ENST00000560942 655 ntBASIC16.25■□□□□ 0.19
CBX8Q9HC52 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 AC093028.1-201ENST00000622998 982 ntBASIC16.25■□□□□ 0.19
CBX8Q9HC52 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.25■□□□□ 0.19
CBX8Q9HC52 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 AC009093.2-202ENST00000620513 2079 ntBASIC16.25■□□□□ 0.19
CBX8Q9HC52 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.25■□□□□ 0.19
CBX8Q9HC52 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CBX8Q9HC52 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 SOCS2P1-201ENST00000417727 557 ntBASIC16.24■□□□□ 0.19
CBX8Q9HC52 AC136604.1-202ENST00000425471 771 ntBASIC16.24■□□□□ 0.19
CBX8Q9HC52 GNAQP1-201ENST00000444815 1067 ntBASIC16.24■□□□□ 0.19
CBX8Q9HC52 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 ALG3P1-201ENST00000508806 1114 ntBASIC16.24■□□□□ 0.19
CBX8Q9HC52 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.24■□□□□ 0.19
CBX8Q9HC52 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CBX8Q9HC52 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 AL391647.1-201ENST00000395664 511 ntBASIC16.23■□□□□ 0.19
CBX8Q9HC52 POM121L8P-201ENST00000417732 1281 ntBASIC16.23■□□□□ 0.19
CBX8Q9HC52 POM121L9P-203ENST00000441984 1285 ntBASIC16.23■□□□□ 0.19
CBX8Q9HC52 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 AC006538.3-201ENST00000612495 578 ntBASIC16.23■□□□□ 0.19
CBX8Q9HC52 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CBX8Q9HC52 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CBX8Q9HC52 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms