Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 AC012617.1-204ENST00000586340 2305 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 MIR770-201ENST00000390219 98 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 PIN1P1-201ENST00000412108 996 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 ARSEP1-201ENST00000420443 635 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 ACTG1P3-201ENST00000431775 1114 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 CTBP2P3-201ENST00000585629 1255 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 GPALPP1-207ENST00000611650 899 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 AC145423.3-201ENST00000615987 467 ntBASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
POLR2J2Q9GZM3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 AL731571.1-201ENST00000617058 5428 ntBASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 AC008494.3-201ENST00000606615 944 ntBASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
POLR2J2Q9GZM3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms