Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 AC025678.2-201ENST00000562061 970 ntBASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 AC138466.3-201ENST00000619983 221 ntBASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 CES1P1-201ENST00000421606 1704 ntBASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GABARAPL3Q9BY60 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 POM121L8P-201ENST00000417732 1281 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 BX842568.4-201ENST00000421222 227 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AC245100.3-201ENST00000441281 285 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 POM121L9P-203ENST00000441984 1285 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 MYCLP2-201ENST00000449268 967 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 DOC2GP-202ENST00000514950 1163 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 SNHG9-202ENST00000564014 471 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AC005252.2-201ENST00000624630 1141 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 AC008761.3-201ENST00000624803 892 ntBASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GABARAPL3Q9BY60 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GABARAPL3Q9BY60 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GABARAPL3Q9BY60 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms