Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 RNA5SP410-201ENST00000516285 106 ntBASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AL161645.1-201ENST00000622716 1255 ntBASIC13.73□□□□□ -0.21
NR1H4Q96RI1 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.73□□□□□ -0.21
NR1H4Q96RI1 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AC124319.4-201ENST00000622931 2161 ntBASIC13.72□□□□□ -0.21
NR1H4Q96RI1 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AC074386.1-202ENST00000463561 864 ntBASIC13.72□□□□□ -0.21
NR1H4Q96RI1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AC105233.2-201ENST00000523697 349 ntBASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AF228730.5-201ENST00000530288 346 ntBASIC13.72□□□□□ -0.21
NR1H4Q96RI1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 AC068137.2-201ENST00000605408 478 ntBASIC13.72□□□□□ -0.21
NR1H4Q96RI1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 PTPRVP-205ENST00000641549 5067 ntBASIC13.72□□□□□ -0.21
NR1H4Q96RI1 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NR1H4Q96RI1 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 TNRC18P1-201ENST00000502875 3650 ntBASIC13.71□□□□□ -0.21
NR1H4Q96RI1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms