Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AC018463.1-201ENST00000456674 917 ntBASIC17.01■□□□□ 0.31
TRIM47Q96LD4 NDUFS6P1-201ENST00000485187 316 ntBASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 PHBP15-201ENST00000574228 665 ntBASIC17.01■□□□□ 0.31
TRIM47Q96LD4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRIM47Q96LD4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRIM47Q96LD4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRIM47Q96LD4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 RPL18AP3-201ENST00000462885 528 ntBASIC17■□□□□ 0.31
TRIM47Q96LD4 AC010234.1-201ENST00000494599 870 ntBASIC17■□□□□ 0.31
TRIM47Q96LD4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17■□□□□ 0.31
TRIM47Q96LD4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
TRIM47Q96LD4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17■□□□□ 0.31
TRIM47Q96LD4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17■□□□□ 0.31
TRIM47Q96LD4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 LINC01783-202ENST00000614408 828 ntBASIC17■□□□□ 0.31
TRIM47Q96LD4 BX284668.2-205ENST00000619677 828 ntBASIC17■□□□□ 0.31
TRIM47Q96LD4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 INTS4P1-203ENST00000641008 3683 ntBASIC17■□□□□ 0.31
TRIM47Q96LD4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17■□□□□ 0.31
TRIM47Q96LD4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17■□□□□ 0.31
TRIM47Q96LD4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM47Q96LD4 AC015909.3-201ENST00000572855 1794 ntBASIC17■□□□□ 0.31
TRIM47Q96LD4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 AL138725.1-201ENST00000407347 1314 ntBASIC16.99■□□□□ 0.31
TRIM47Q96LD4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM47Q96LD4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms