Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ERCC4Q92889 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC4Q92889 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 ACKR1-201ENST00000368121 1240 ntBASIC16.55■□□□□ 0.24
ERCC4Q92889 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 AC236430.1-201ENST00000402231 743 ntBASIC16.55■□□□□ 0.24
ERCC4Q92889 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.55■□□□□ 0.24
ERCC4Q92889 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.55■□□□□ 0.24
ERCC4Q92889 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.55■□□□□ 0.24
ERCC4Q92889 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ERCC4Q92889 KRT18P25-201ENST00000508931 1278 ntBASIC16.55■□□□□ 0.24
ERCC4Q92889 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.55■□□□□ 0.24
ERCC4Q92889 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 AJ011932.1-201ENST00000621707 465 ntBASIC16.55■□□□□ 0.24
ERCC4Q92889 AL603764.1-201ENST00000636452 321 ntBASIC16.55■□□□□ 0.24
ERCC4Q92889 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ERCC4Q92889 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ERCC4Q92889 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC4Q92889 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ERCC4Q92889 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 TCAM1P-207ENST00000485295 1537 ntBASIC16.55■□□□□ 0.24
ERCC4Q92889 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ERCC4Q92889 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ERCC4Q92889 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ERCC4Q92889 FKBP4P6-201ENST00000457486 1332 ntBASIC16.54■□□□□ 0.24
ERCC4Q92889 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.54■□□□□ 0.24
ERCC4Q92889 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ERCC4Q92889 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
ERCC4Q92889 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.54■□□□□ 0.24
ERCC4Q92889 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.54■□□□□ 0.24
ERCC4Q92889 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ERCC4Q92889 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
ERCC4Q92889 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ERCC4Q92889 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ERCC4Q92889 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC4Q92889 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
ERCC4Q92889 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 MIR497HG-202ENST00000572453 3838 ntBASIC16.53■□□□□ 0.24
ERCC4Q92889 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ERCC4Q92889 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 AL391825.1-201ENST00000457671 1364 ntBASIC16.53■□□□□ 0.24
ERCC4Q92889 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC4Q92889 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC4Q92889 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC4Q92889 AC072061.1-201ENST00000569710 2234 ntBASIC16.53■□□□□ 0.24
ERCC4Q92889 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC4Q92889 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC4Q92889 DGCR5-201ENST00000399539 862 ntBASIC16.53■□□□□ 0.24
ERCC4Q92889 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC4Q92889 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.53■□□□□ 0.24
ERCC4Q92889 TMEM198B-204ENST00000484016 896 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms