Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL22A1Q8NFW1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL22A1Q8NFW1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL22A1Q8NFW1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.54■□□□□ 0.56
COL22A1Q8NFW1 KRT8P25-201ENST00000473150 1456 ntBASIC18.54■□□□□ 0.56
COL22A1Q8NFW1 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL22A1Q8NFW1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 RN7SL33P-201ENST00000462543 342 ntBASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 AC106785.2-201ENST00000564385 1319 ntBASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL22A1Q8NFW1 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 BX510359.7-201ENST00000619819 630 ntBASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 SNORA50D-202ENST00000627561 132 ntBASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 AC024075.2-201ENST00000598112 1473 ntBASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 AC011498.7-201ENST00000624986 2027 ntBASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.52■□□□□ 0.56
COL22A1Q8NFW1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 KLK8-203ENST00000347619 555 ntTSL 2 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 RBMXP1-201ENST00000408004 1191 ntBASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 AL139424.3-202ENST00000641619 917 ntBASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.52■□□□□ 0.55
COL22A1Q8NFW1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 AC079325.1-201ENST00000430386 857 ntBASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms