Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
NUP35Q8NFH5 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AC092053.3-201ENST00000641308 4975 ntBASIC10.89□□□□□ -0.67
NUP35Q8NFH5 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AC115284.2-201ENST00000624646 2054 ntBASIC10.89□□□□□ -0.67
NUP35Q8NFH5 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AC026271.4-201ENST00000578214 1833 ntBASIC10.89□□□□□ -0.67
NUP35Q8NFH5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AL353779.1-201ENST00000434793 351 ntBASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AC007967.4-201ENST00000614700 386 ntBASIC10.89□□□□□ -0.67
NUP35Q8NFH5 BAP1-211ENST00000615113 489 ntBASIC10.89□□□□□ -0.67
NUP35Q8NFH5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 AC015819.3-201ENST00000624305 2674 ntBASIC10.89□□□□□ -0.67
NUP35Q8NFH5 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NUP35Q8NFH5 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 AC004623.1-201ENST00000624592 2127 ntBASIC10.88□□□□□ -0.67
NUP35Q8NFH5 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.88□□□□□ -0.67
NUP35Q8NFH5 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms