Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.92□□□□□ -0.18
SRFBP1Q8NEF9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SRFBP1Q8NEF9 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SRFBP1Q8NEF9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SRFBP1Q8NEF9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.92□□□□□ -0.18
SRFBP1Q8NEF9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SRFBP1Q8NEF9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 BTBD6P1-201ENST00000412176 1267 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AL157407.1-201ENST00000435784 904 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 MTX1P1-201ENST00000440904 838 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 TUBB8P8-201ENST00000458717 1058 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 RBM8B-201ENST00000555532 525 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AL359881.2-201ENST00000602973 570 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AL023803.2-201ENST00000620080 638 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 HSPA7-201ENST00000445535 1927 ntBASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SRFBP1Q8NEF9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.9□□□□□ -0.18
SRFBP1Q8NEF9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms