Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 HSPA8P5-201ENST00000456928 2069 ntBASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RASGEF1AQ8N9B8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 AC026748.1-201ENST00000624349 3251 ntBASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 HIST2H2BC-201ENST00000498492 580 ntBASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 RCC2P8-201ENST00000502779 1035 ntBASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 TUBBP5-203ENST00000508529 1334 ntBASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.28□□□□□ -0.12
RASGEF1AQ8N9B8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RASGEF1AQ8N9B8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 RN7SKP214-201ENST00000364208 315 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AC011742.3-201ENST00000439053 820 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AC021016.3-201ENST00000608367 477 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AL157813.1-201ENST00000612996 587 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AL805961.1-203ENST00000641078 1258 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AC005089.1-201ENST00000619486 2241 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AC152010.1-201ENST00000415779 2006 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 C8orf49-201ENST00000525043 1968 ntBASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RASGEF1AQ8N9B8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms