Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 AL354989.2-201ENST00000435838 1540 ntBASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC010141.1-201ENST00000411585 623 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 NME2P1-201ENST00000426182 414 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 KRT43P-201ENST00000434019 910 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 C2orf69P2-201ENST00000562032 1123 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 MIR4683-201ENST00000579659 81 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AL358472.3-201ENST00000608147 415 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC027601.3-201ENST00000622907 509 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC089987.1-201ENST00000551654 2209 ntBASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.37□□□□□ -0.27
LSMEM1Q8N8F7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AL161932.2-201ENST00000435436 679 ntBASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AL355994.2-201ENST00000447882 704 ntBASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 CICP12-201ENST00000455801 843 ntBASIC13.36□□□□□ -0.27
LSMEM1Q8N8F7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms