Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 RPL18P13-201ENST00000478088 569 ntBASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 MIR4783-201ENST00000580343 82 ntBASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC005962.1-201ENST00000584100 773 ntBASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC022748.3-201ENST00000621828 275 ntBASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC131212.3-201ENST00000624087 4219 ntBASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRIM48Q8IWZ4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 AC104073.2-201ENST00000453737 312 ntBASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 BX284668.4-201ENST00000453917 508 ntBASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 AC090164.2-201ENST00000611487 516 ntBASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 AL139099.5-201ENST00000635274 300 ntBASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 INTS4P1-203ENST00000641008 3683 ntBASIC14.33□□□□□ -0.12
TRIM48Q8IWZ4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.32□□□□□ -0.12
TRIM48Q8IWZ4 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms