Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 ALG1L8P-201ENST00000533887 760 ntBASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.78□□□□□ -0.36
LYSMD2Q8IV50 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.77□□□□□ -0.36
LYSMD2Q8IV50 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AL121723.1-201ENST00000445194 1519 ntBASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 ABCD1P2-201ENST00000429313 1601 ntBASIC12.77□□□□□ -0.37
LYSMD2Q8IV50 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LYSMD2Q8IV50 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms