Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.46■□□□□ 0.07
RNF135Q8IUD6 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 AL137783.1-201ENST00000623494 1896 ntBASIC15.46■□□□□ 0.06
RNF135Q8IUD6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF135Q8IUD6 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 AC087392.5-201ENST00000612517 489 ntBASIC15.45■□□□□ 0.06
RNF135Q8IUD6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 AC105137.3-201ENST00000617588 984 ntBASIC15.45■□□□□ 0.06
RNF135Q8IUD6 CICP23-201ENST00000605013 2741 ntBASIC15.45■□□□□ 0.06
RNF135Q8IUD6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 MROH4P-201ENST00000431302 1578 ntBASIC15.45■□□□□ 0.06
RNF135Q8IUD6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RNF135Q8IUD6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AC078875.1-201ENST00000431907 724 ntBASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AL627422.1-201ENST00000434104 580 ntBASIC15.44■□□□□ 0.06
RNF135Q8IUD6 LYPLA2P1-203ENST00000447689 696 ntBASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 CHCHD2P9-201ENST00000461726 456 ntBASIC15.44■□□□□ 0.06
RNF135Q8IUD6 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 DUX4L47-201ENST00000566374 394 ntBASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AC073911.3-201ENST00000624401 631 ntBASIC15.44■□□□□ 0.06
RNF135Q8IUD6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 AC244394.1-201ENST00000435000 1665 ntBASIC15.44■□□□□ 0.06
RNF135Q8IUD6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF135Q8IUD6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms