Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 DGCR9-201ENST00000609630 2415 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 MEX3B-202ENST00000558133 4333 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 RNU1-114P-201ENST00000365297 166 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AL590640.2-201ENST00000457038 527 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 DUX4L45-201ENST00000566406 1057 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC091271.1-201ENST00000611877 1162 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC027601.5-201ENST00000624065 2482 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC099521.3-201ENST00000624251 2938 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC9.75□□□□□ -0.85
SCXQ7RTU7 AC020907.1-201ENST00000616460 1350 ntBASIC9.75□□□□□ -0.85
SCXQ7RTU7 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SCXQ7RTU7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 C18orf15-201ENST00000623680 2534 ntBASIC9.74□□□□□ -0.85
SCXQ7RTU7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
SCXQ7RTU7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SCXQ7RTU7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms