Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AP001889.1-201ENST00000525414 633 ntBASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 SLC25A47P1-201ENST00000531577 414 ntBASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AL022328.1-201ENST00000610050 478 ntBASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 BX088702.1-201ENST00000610784 235 ntBASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC090505.1-201ENST00000430515 1834 ntBASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AL138709.1-201ENST00000614840 1693 ntBASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
HIST3H2AQ7L7L0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HIST3H2AQ7L7L0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.33□□□□□ -0.27
HIST3H2AQ7L7L0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
HIST3H2AQ7L7L0 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 FAM8A4P-201ENST00000435433 1213 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 RN7SL837P-201ENST00000463010 287 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 AC106760.1-201ENST00000508690 800 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 RNA5SP486-201ENST00000515961 83 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 AC025048.6-201ENST00000634326 1161 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CSPG4P11-201ENST00000560634 4910 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 AC215219.1-201ENST00000400706 1817 ntBASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HIST3H2AQ7L7L0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms