Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 AL133466.1-201ENST00000447582 150 ntBASIC17.23■□□□□ 0.35
CTR9Q6PD62 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTR9Q6PD62 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 AC105129.2-201ENST00000559536 390 ntBASIC17.23■□□□□ 0.35
CTR9Q6PD62 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTR9Q6PD62 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 AC007686.3-201ENST00000619017 3487 ntBASIC17.23■□□□□ 0.35
CTR9Q6PD62 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTR9Q6PD62 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTR9Q6PD62 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CTR9Q6PD62 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CTR9Q6PD62 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 OR2I1P-209ENST00000641730 5365 ntBASIC17.23■□□□□ 0.35
CTR9Q6PD62 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CTR9Q6PD62 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 INTS4P1-203ENST00000641008 3683 ntBASIC17.22■□□□□ 0.35
CTR9Q6PD62 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 AC020922.3-201ENST00000595064 547 ntBASIC17.22■□□□□ 0.35
CTR9Q6PD62 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTR9Q6PD62 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.22■□□□□ 0.35
CTR9Q6PD62 AC097376.2-205ENST00000610159 5334 ntBASIC17.22■□□□□ 0.35
CTR9Q6PD62 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 TSPY25P-201ENST00000429463 745 ntBASIC17.21■□□□□ 0.35
CTR9Q6PD62 AC006335.1-201ENST00000445200 547 ntBASIC17.21■□□□□ 0.35
CTR9Q6PD62 UPF3AP2-201ENST00000457924 1132 ntBASIC17.21■□□□□ 0.35
CTR9Q6PD62 RN7SL720P-201ENST00000488178 304 ntBASIC17.21■□□□□ 0.35
CTR9Q6PD62 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 MIR3188-201ENST00000583494 85 ntBASIC17.21■□□□□ 0.35
CTR9Q6PD62 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 AC068587.10-201ENST00000641210 219 ntBASIC17.21■□□□□ 0.35
CTR9Q6PD62 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.21■□□□□ 0.35
CTR9Q6PD62 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.21■□□□□ 0.35
CTR9Q6PD62 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTR9Q6PD62 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms