Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP1Q04837 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 RNU1-114P-201ENST00000365297 166 ntBASIC12.31□□□□□ -0.44
SSBP1Q04837 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SSBP1Q04837 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP1Q04837 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP1Q04837 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SSBP1Q04837 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP1Q04837 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP1Q04837 AC005829.1-201ENST00000570002 483 ntBASIC12.31□□□□□ -0.44
SSBP1Q04837 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.31□□□□□ -0.44
SSBP1Q04837 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.31□□□□□ -0.44
SSBP1Q04837 AL662799.1-202ENST00000614205 422 ntBASIC12.31□□□□□ -0.44
SSBP1Q04837 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.31□□□□□ -0.44
SSBP1Q04837 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SSBP1Q04837 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP1Q04837 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SSBP1Q04837 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.3□□□□□ -0.44
SSBP1Q04837 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
SSBP1Q04837 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 BTBD7P1-201ENST00000447253 1453 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SSBP1Q04837 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 VDAC1P7-201ENST00000462417 847 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.3□□□□□ -0.44
SSBP1Q04837 AC009955.4-201ENST00000597192 544 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 AC138696.2-201ENST00000607376 223 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SSBP1Q04837 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SSBP1Q04837 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 AGGF1P10-201ENST00000635005 2191 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 LRRC59-203ENST00000576448 1531 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.3□□□□□ -0.44
SSBP1Q04837 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.3□□□□□ -0.44
SSBP1Q04837 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SSBP1Q04837 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 AC008620.2-201ENST00000510294 1569 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSBP1Q04837 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.3□□□□□ -0.44
SSBP1Q04837 AL022323.5-201ENST00000624101 2059 ntBASIC12.3□□□□□ -0.44
SSBP1Q04837 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SSBP1Q04837 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms