Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
YBX1P67809 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
YBX1P67809 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
YBX1P67809 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 TMBIM7P-202ENST00000641474 1516 ntBASIC14.15□□□□□ -0.14
YBX1P67809 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.15□□□□□ -0.14
YBX1P67809 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
YBX1P67809 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.15□□□□□ -0.14
YBX1P67809 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
YBX1P67809 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.15□□□□□ -0.14
YBX1P67809 BRWD1P1-201ENST00000401091 371 ntBASIC14.15□□□□□ -0.14
YBX1P67809 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.15□□□□□ -0.14
YBX1P67809 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.15□□□□□ -0.14
YBX1P67809 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.15□□□□□ -0.14
YBX1P67809 RNMTL1P1-201ENST00000454103 560 ntBASIC14.15□□□□□ -0.14
YBX1P67809 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.15□□□□□ -0.14
YBX1P67809 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.15□□□□□ -0.14
YBX1P67809 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.15□□□□□ -0.14
YBX1P67809 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.15□□□□□ -0.14
YBX1P67809 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.15□□□□□ -0.14
YBX1P67809 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.15□□□□□ -0.14
YBX1P67809 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.15□□□□□ -0.14
YBX1P67809 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.15□□□□□ -0.14
YBX1P67809 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
YBX1P67809 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.15□□□□□ -0.14
YBX1P67809 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
YBX1P67809 HSPA8P5-201ENST00000456928 2069 ntBASIC14.14□□□□□ -0.15
YBX1P67809 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
YBX1P67809 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
YBX1P67809 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
YBX1P67809 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.14□□□□□ -0.15
YBX1P67809 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 AL645933.1-201ENST00000440087 609 ntBASIC14.14□□□□□ -0.15
YBX1P67809 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.14□□□□□ -0.15
YBX1P67809 AC104306.2-201ENST00000451877 341 ntBASIC14.14□□□□□ -0.15
YBX1P67809 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.14□□□□□ -0.15
YBX1P67809 AC092658.1-201ENST00000505836 891 ntBASIC14.14□□□□□ -0.15
YBX1P67809 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.14□□□□□ -0.15
YBX1P67809 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.14□□□□□ -0.15
YBX1P67809 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 RN7SL219P-201ENST00000582872 296 ntBASIC14.14□□□□□ -0.15
YBX1P67809 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.14□□□□□ -0.15
YBX1P67809 AC008825.2-201ENST00000603374 718 ntBASIC14.14□□□□□ -0.15
YBX1P67809 MIR6799-201ENST00000620297 69 ntBASIC14.14□□□□□ -0.15
YBX1P67809 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.14□□□□□ -0.15
YBX1P67809 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.14□□□□□ -0.15
YBX1P67809 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
YBX1P67809 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.14□□□□□ -0.15
YBX1P67809 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms