Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RHBDL3P58872 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.91■□□□□ 0.3
RHBDL3P58872 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
RHBDL3P58872 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.91■□□□□ 0.3
RHBDL3P58872 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 AP003398.1-201ENST00000531124 318 ntBASIC16.91■□□□□ 0.3
RHBDL3P58872 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.91■□□□□ 0.3
RHBDL3P58872 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDL3P58872 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDL3P58872 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.91■□□□□ 0.3
RHBDL3P58872 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.91■□□□□ 0.3
RHBDL3P58872 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDL3P58872 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RHBDL3P58872 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.9■□□□□ 0.3
RHBDL3P58872 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RHBDL3P58872 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RHBDL3P58872 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 AC025271.4-201ENST00000621477 1726 ntBASIC16.9■□□□□ 0.3
RHBDL3P58872 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDL3P58872 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.9■□□□□ 0.3
RHBDL3P58872 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDL3P58872 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.9■□□□□ 0.3
RHBDL3P58872 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDL3P58872 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDL3P58872 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDL3P58872 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.9■□□□□ 0.3
RHBDL3P58872 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.9■□□□□ 0.3
RHBDL3P58872 KRT8P43-201ENST00000406052 1458 ntBASIC16.9■□□□□ 0.3
RHBDL3P58872 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDL3P58872 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHBDL3P58872 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.9■□□□□ 0.3
RHBDL3P58872 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHBDL3P58872 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RHBDL3P58872 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RHBDL3P58872 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RHBDL3P58872 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RHBDL3P58872 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RHBDL3P58872 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RHBDL3P58872 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 RNVU1-8-201ENST00000364272 125 ntBASIC16.89■□□□□ 0.29
RHBDL3P58872 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.89■□□□□ 0.29
RHBDL3P58872 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHBDL3P58872 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.89■□□□□ 0.29
RHBDL3P58872 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms