Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.56■□□□□ 0.4
NUP98P52948 COQ10BP2-201ENST00000513804 724 ntBASIC17.56■□□□□ 0.4
NUP98P52948 AL359219.1-201ENST00000556311 934 ntBASIC17.56■□□□□ 0.4
NUP98P52948 CYP4F36P-201ENST00000589193 186 ntBASIC17.56■□□□□ 0.4
NUP98P52948 FMO6P-201ENST00000236166 1620 ntBASIC17.56■□□□□ 0.4
NUP98P52948 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NUP98P52948 AC140479.7-201ENST00000636301 2332 ntBASIC17.56■□□□□ 0.4
NUP98P52948 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 AC092115.1-201ENST00000566277 1402 ntBASIC17.56■□□□□ 0.4
NUP98P52948 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 OR7E115P-201ENST00000382617 1024 ntBASIC17.56■□□□□ 0.4
NUP98P52948 FAM21EP-201ENST00000417804 985 ntBASIC17.56■□□□□ 0.4
NUP98P52948 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP98P52948 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.56■□□□□ 0.4
NUP98P52948 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP98P52948 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.56■□□□□ 0.4
NUP98P52948 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17.56■□□□□ 0.4
NUP98P52948 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
NUP98P52948 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.56■□□□□ 0.4
NUP98P52948 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NUP98P52948 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NUP98P52948 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NUP98P52948 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NUP98P52948 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NUP98P52948 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.55■□□□□ 0.4
NUP98P52948 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.55■□□□□ 0.4
NUP98P52948 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.55■□□□□ 0.4
NUP98P52948 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.55■□□□□ 0.4
NUP98P52948 PTGER4P2-201ENST00000328411 252 ntBASIC17.55■□□□□ 0.4
NUP98P52948 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 PTGER4P3-201ENST00000458150 252 ntBASIC17.55■□□□□ 0.4
NUP98P52948 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.55■□□□□ 0.4
NUP98P52948 AC087203.1-201ENST00000532111 1181 ntBASIC17.55■□□□□ 0.4
NUP98P52948 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.55■□□□□ 0.4
NUP98P52948 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
NUP98P52948 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.55■□□□□ 0.4
NUP98P52948 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NUP98P52948 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC17.55■□□□□ 0.4
NUP98P52948 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.55■□□□□ 0.4
NUP98P52948 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NUP98P52948 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NUP98P52948 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUP98P52948 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
NUP98P52948 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP98P52948 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP98P52948 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NUP98P52948 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NUP98P52948 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 U3.5-201ENST00000363448 216 ntBASIC17.54■□□□□ 0.4
NUP98P52948 AC106827.1-201ENST00000366454 431 ntBASIC17.54■□□□□ 0.4
NUP98P52948 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 MIR566-201ENST00000385187 94 ntBASIC17.54■□□□□ 0.4
NUP98P52948 GGTLC4P-201ENST00000402176 664 ntBASIC17.54■□□□□ 0.4
NUP98P52948 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP98P52948 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.54■□□□□ 0.4
NUP98P52948 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NUP98P52948 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP98P52948 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC17.54■□□□□ 0.4
NUP98P52948 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NUP98P52948 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.54■□□□□ 0.4
NUP98P52948 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUP98P52948 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms