Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 AC005912.2-201ENST00000619492 2400 ntBASIC13.38□□□□□ -0.27
RFC3P40938 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RFC3P40938 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 AC092135.3-201ENST00000624151 1846 ntBASIC13.37□□□□□ -0.27
RFC3P40938 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 FAM90A7P-201ENST00000382628 1395 ntBASIC13.37□□□□□ -0.27
RFC3P40938 FAM90A23P-201ENST00000400136 1395 ntBASIC13.37□□□□□ -0.27
RFC3P40938 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.37□□□□□ -0.27
RFC3P40938 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.37□□□□□ -0.27
RFC3P40938 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.37□□□□□ -0.27
RFC3P40938 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.37□□□□□ -0.27
RFC3P40938 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.37□□□□□ -0.27
RFC3P40938 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.37□□□□□ -0.27
RFC3P40938 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 AC009779.1-201ENST00000551138 283 ntBASIC13.37□□□□□ -0.27
RFC3P40938 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
RFC3P40938 RN7SL574P-201ENST00000581512 297 ntBASIC13.37□□□□□ -0.27
RFC3P40938 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
RFC3P40938 AC100757.4-201ENST00000626934 759 ntBASIC13.37□□□□□ -0.27
RFC3P40938 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 OR2I1P-209ENST00000641730 5365 ntBASIC13.37□□□□□ -0.27
RFC3P40938 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 MRPL37P1-201ENST00000592451 1337 ntBASIC13.37□□□□□ -0.27
RFC3P40938 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RFC3P40938 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.37□□□□□ -0.27
RFC3P40938 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFC3P40938 AC006504.5-208ENST00000588784 2401 ntBASIC13.37□□□□□ -0.27
RFC3P40938 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFC3P40938 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFC3P40938 INTS4P1-203ENST00000641008 3683 ntBASIC13.36□□□□□ -0.27
RFC3P40938 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.36□□□□□ -0.27
RFC3P40938 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.36□□□□□ -0.27
RFC3P40938 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.36□□□□□ -0.27
RFC3P40938 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
RFC3P40938 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.36□□□□□ -0.27
RFC3P40938 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFC3P40938 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RFC3P40938 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFC3P40938 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFC3P40938 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFC3P40938 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.36□□□□□ -0.27
RFC3P40938 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RFC3P40938 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms