Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GDNFP39905 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GDNFP39905 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.74□□□□□ -0.37
GDNFP39905 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
GDNFP39905 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 KRT8P14-201ENST00000414254 1442 ntBASIC12.74□□□□□ -0.37
GDNFP39905 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
GDNFP39905 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
GDNFP39905 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.74□□□□□ -0.37
GDNFP39905 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
GDNFP39905 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.74□□□□□ -0.37
GDNFP39905 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.74□□□□□ -0.37
GDNFP39905 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.74□□□□□ -0.37
GDNFP39905 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
GDNFP39905 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
GDNFP39905 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 AC011498.7-201ENST00000624986 2027 ntBASIC12.74□□□□□ -0.37
GDNFP39905 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
GDNFP39905 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GDNFP39905 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
GDNFP39905 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GDNFP39905 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.73□□□□□ -0.37
GDNFP39905 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.73□□□□□ -0.37
GDNFP39905 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
GDNFP39905 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
GDNFP39905 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.73□□□□□ -0.37
GDNFP39905 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
GDNFP39905 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.73□□□□□ -0.37
GDNFP39905 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.73□□□□□ -0.37
GDNFP39905 SPTLC1P1-201ENST00000447199 261 ntBASIC12.73□□□□□ -0.37
GDNFP39905 TSPY16P-201ENST00000449843 468 ntBASIC12.73□□□□□ -0.37
GDNFP39905 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.73□□□□□ -0.37
GDNFP39905 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.73□□□□□ -0.37
GDNFP39905 SPCS2P1-201ENST00000561636 679 ntBASIC12.73□□□□□ -0.37
GDNFP39905 RARRES2P5-201ENST00000564013 466 ntBASIC12.73□□□□□ -0.37
GDNFP39905 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.73□□□□□ -0.37
GDNFP39905 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.73□□□□□ -0.37
GDNFP39905 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GDNFP39905 AJ011932.1-201ENST00000621707 465 ntBASIC12.73□□□□□ -0.37
GDNFP39905 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms