Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
FDFT1P37268 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.86□□□□□ -0.03
FDFT1P37268 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.86□□□□□ -0.03
FDFT1P37268 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 DGCR9-201ENST00000609630 2415 ntBASIC14.85□□□□□ -0.03
FDFT1P37268 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 AC112492.5-201ENST00000421897 457 ntBASIC14.85□□□□□ -0.03
FDFT1P37268 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
FDFT1P37268 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.85□□□□□ -0.03
FDFT1P37268 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 AP005018.1-201ENST00000525475 301 ntBASIC14.85□□□□□ -0.03
FDFT1P37268 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.85□□□□□ -0.03
FDFT1P37268 C2orf69P2-201ENST00000562032 1123 ntBASIC14.85□□□□□ -0.03
FDFT1P37268 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.85□□□□□ -0.03
FDFT1P37268 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.85□□□□□ -0.03
FDFT1P37268 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.85□□□□□ -0.03
FDFT1P37268 IGHV3-72-202ENST00000621503 303 ntBASIC14.85□□□□□ -0.03
FDFT1P37268 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.85□□□□□ -0.03
FDFT1P37268 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.85□□□□□ -0.03
FDFT1P37268 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
FDFT1P37268 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 KRT8P4-201ENST00000509735 1454 ntBASIC14.84□□□□□ -0.03
FDFT1P37268 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 SHC1P1-201ENST00000425230 1745 ntBASIC14.84□□□□□ -0.03
FDFT1P37268 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.84□□□□□ -0.03
FDFT1P37268 USP17L6P-201ENST00000382470 1197 ntBASIC14.84□□□□□ -0.03
FDFT1P37268 MIR1202-201ENST00000408529 83 ntBASIC14.84□□□□□ -0.03
FDFT1P37268 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms