Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SLC6A4P31645 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 OR2K2-202ENST00000374428 1038 ntBASIC14.84□□□□□ -0.03
SLC6A4P31645 ELK2AP-201ENST00000392510 1007 ntBASIC14.84□□□□□ -0.03
SLC6A4P31645 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC6A4P31645 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC6A4P31645 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A4P31645 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A4P31645 AC012044.1-201ENST00000603431 297 ntBASIC14.84□□□□□ -0.03
SLC6A4P31645 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A4P31645 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SLC6A4P31645 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A4P31645 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A4P31645 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A4P31645 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A4P31645 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A4P31645 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A4P31645 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC6A4P31645 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC6A4P31645 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A4P31645 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
SLC6A4P31645 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.83□□□□□ -0.03
SLC6A4P31645 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A4P31645 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A4P31645 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A4P31645 HSPA8P5-201ENST00000456928 2069 ntBASIC14.83□□□□□ -0.03
SLC6A4P31645 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 PCDHA3-202ENST00000532566 4594 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SLC6A4P31645 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
SLC6A4P31645 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A4P31645 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SLC6A4P31645 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A4P31645 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A4P31645 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A4P31645 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A4P31645 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A4P31645 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A4P31645 RPS9P1-201ENST00000419943 583 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A4P31645 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A4P31645 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.83□□□□□ -0.04
SLC6A4P31645 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 AC093752.3-201ENST00000567343 901 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms