Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCN1P31025 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LCN1P31025 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCN1P31025 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCN1P31025 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCN1P31025 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LCN1P31025 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCN1P31025 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LCN1P31025 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.52□□□□□ -0.24
LCN1P31025 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
LCN1P31025 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
LCN1P31025 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LCN1P31025 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.52□□□□□ -0.25
LCN1P31025 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
LCN1P31025 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.52□□□□□ -0.25
LCN1P31025 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.52□□□□□ -0.25
LCN1P31025 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.52□□□□□ -0.25
LCN1P31025 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.52□□□□□ -0.25
LCN1P31025 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.52□□□□□ -0.25
LCN1P31025 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.52□□□□□ -0.25
LCN1P31025 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.52□□□□□ -0.25
LCN1P31025 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.52□□□□□ -0.25
LCN1P31025 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.52□□□□□ -0.25
LCN1P31025 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.52□□□□□ -0.25
LCN1P31025 MIR6775-201ENST00000617557 69 ntBASIC13.52□□□□□ -0.25
LCN1P31025 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.52□□□□□ -0.25
LCN1P31025 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.52□□□□□ -0.25
LCN1P31025 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.52□□□□□ -0.25
LCN1P31025 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.52□□□□□ -0.25
LCN1P31025 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LCN1P31025 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LCN1P31025 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LCN1P31025 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.52□□□□□ -0.25
LCN1P31025 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.51□□□□□ -0.25
LCN1P31025 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.51□□□□□ -0.25
LCN1P31025 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.51□□□□□ -0.25
LCN1P31025 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 ANKRD19P-201ENST00000338192 862 ntBASIC13.51□□□□□ -0.25
LCN1P31025 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LCN1P31025 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.51□□□□□ -0.25
LCN1P31025 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 FAM21FP-201ENST00000426241 1131 ntBASIC13.51□□□□□ -0.25
LCN1P31025 HLA-V-201ENST00000429037 534 ntBASIC13.51□□□□□ -0.25
LCN1P31025 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.51□□□□□ -0.25
LCN1P31025 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 KRT223P-202ENST00000449164 1292 ntBASIC13.51□□□□□ -0.25
LCN1P31025 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.51□□□□□ -0.25
LCN1P31025 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.51□□□□□ -0.25
LCN1P31025 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.51□□□□□ -0.25
LCN1P31025 AP006547.1-201ENST00000563435 692 ntBASIC13.51□□□□□ -0.25
LCN1P31025 AC132192.2-201ENST00000596206 1147 ntBASIC13.51□□□□□ -0.25
LCN1P31025 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
LCN1P31025 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
LCN1P31025 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LCN1P31025 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LCN1P31025 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms