Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PAUPAR-201ENST00000630360 2965 ntBASIC15.94■□□□□ 0.14
CTGFP29279 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.94■□□□□ 0.14
CTGFP29279 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTGFP29279 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTGFP29279 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.94■□□□□ 0.14
CTGFP29279 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTGFP29279 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.94■□□□□ 0.14
CTGFP29279 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CTGFP29279 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTGFP29279 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CTGFP29279 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CTGFP29279 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CTGFP29279 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 AC098657.1-201ENST00000416270 1135 ntBASIC15.93■□□□□ 0.14
CTGFP29279 RPL14-203ENST00000416518 812 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 CDK4P1-201ENST00000454213 828 ntBASIC15.93■□□□□ 0.14
CTGFP29279 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.93■□□□□ 0.14
CTGFP29279 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 AC004801.1-201ENST00000549557 360 ntBASIC15.93■□□□□ 0.14
CTGFP29279 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC15.93■□□□□ 0.14
CTGFP29279 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 CSTP2-201ENST00000610599 398 ntBASIC15.93■□□□□ 0.14
CTGFP29279 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.93■□□□□ 0.14
CTGFP29279 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CTGFP29279 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC15.93■□□□□ 0.14
CTGFP29279 AL357143.1-203ENST00000639750 881 ntBASIC15.93■□□□□ 0.14
CTGFP29279 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.93■□□□□ 0.14
CTGFP29279 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.93■□□□□ 0.14
CTGFP29279 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CTGFP29279 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CTGFP29279 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 AL109954.1-202ENST00000564051 2148 ntBASIC15.92■□□□□ 0.14
CTGFP29279 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 HLA-DMA-202ENST00000395303 1007 ntBASIC15.92■□□□□ 0.14
CTGFP29279 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.92■□□□□ 0.14
CTGFP29279 AL137244.1-201ENST00000422931 865 ntBASIC15.92■□□□□ 0.14
CTGFP29279 AC103563.1-201ENST00000429316 123 ntBASIC15.92■□□□□ 0.14
CTGFP29279 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.92■□□□□ 0.14
CTGFP29279 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC15.92■□□□□ 0.14
CTGFP29279 PEBP1P3-201ENST00000455475 548 ntBASIC15.92■□□□□ 0.14
CTGFP29279 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.92■□□□□ 0.14
CTGFP29279 ALG1L15P-201ENST00000482834 794 ntBASIC15.92■□□□□ 0.14
CTGFP29279 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC15.92■□□□□ 0.14
CTGFP29279 GOLGA2P8-201ENST00000505201 779 ntBASIC15.92■□□□□ 0.14
CTGFP29279 AC016582.2-202ENST00000587765 1094 ntBASIC15.92■□□□□ 0.14
CTGFP29279 AC020904.3-201ENST00000624199 442 ntBASIC15.92■□□□□ 0.14
CTGFP29279 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.92■□□□□ 0.14
CTGFP29279 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.92■□□□□ 0.14
CTGFP29279 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.92■□□□□ 0.14
CTGFP29279 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CTGFP29279 SALL4P6-201ENST00000429385 1691 ntBASIC15.92■□□□□ 0.14
CTGFP29279 SHMT1P1-201ENST00000419974 1312 ntBASIC15.92■□□□□ 0.14
CTGFP29279 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.92■□□□□ 0.14
CTGFP29279 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms