Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
VARSP26640 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.44□□□□□ -0.1
VARSP26640 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 NUTM2HP-201ENST00000442076 2498 ntBASIC14.43□□□□□ -0.1
VARSP26640 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.43□□□□□ -0.1
VARSP26640 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.43□□□□□ -0.1
VARSP26640 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VARSP26640 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.43□□□□□ -0.1
VARSP26640 POM121L8P-201ENST00000417732 1281 ntBASIC14.43□□□□□ -0.1
VARSP26640 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.43□□□□□ -0.1
VARSP26640 POM121L9P-203ENST00000441984 1285 ntBASIC14.43□□□□□ -0.1
VARSP26640 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.43□□□□□ -0.1
VARSP26640 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.43□□□□□ -0.1
VARSP26640 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.43□□□□□ -0.1
VARSP26640 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.43□□□□□ -0.1
VARSP26640 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.43□□□□□ -0.1
VARSP26640 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.43□□□□□ -0.1
VARSP26640 AC025279.2-201ENST00000569730 653 ntBASIC14.43□□□□□ -0.1
VARSP26640 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.43□□□□□ -0.1
VARSP26640 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.43□□□□□ -0.1
VARSP26640 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VARSP26640 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.43□□□□□ -0.1
VARSP26640 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VARSP26640 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.42□□□□□ -0.1
VARSP26640 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VARSP26640 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 INE2-201ENST00000630399 1874 ntBASIC14.42□□□□□ -0.1
VARSP26640 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.42□□□□□ -0.1
VARSP26640 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VARSP26640 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 AC011474.4-201ENST00000623523 2076 ntBASIC14.42□□□□□ -0.1
VARSP26640 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
VARSP26640 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.42□□□□□ -0.1
VARSP26640 AL590640.2-201ENST00000457038 527 ntBASIC14.42□□□□□ -0.1
VARSP26640 AC007688.1-201ENST00000475592 759 ntBASIC14.42□□□□□ -0.1
VARSP26640 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.42□□□□□ -0.1
VARSP26640 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.42□□□□□ -0.1
VARSP26640 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.42□□□□□ -0.1
VARSP26640 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.42□□□□□ -0.1
VARSP26640 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 ECM1P1-201ENST00000604092 1279 ntBASIC14.42□□□□□ -0.1
VARSP26640 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.42□□□□□ -0.1
VARSP26640 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.42□□□□□ -0.1
VARSP26640 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms