Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 E2F3P2-201ENST00000447755 1422 ntBASIC12.48□□□□□ -0.41
CCL1P22362 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 KRT43P-201ENST00000434019 910 ntBASIC12.48□□□□□ -0.41
CCL1P22362 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL1P22362 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CCL1P22362 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL1P22362 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 AL596325.1-201ENST00000563991 1082 ntBASIC12.48□□□□□ -0.41
CCL1P22362 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.48□□□□□ -0.41
CCL1P22362 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 AC132938.2-201ENST00000579188 680 ntBASIC12.48□□□□□ -0.41
CCL1P22362 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.48□□□□□ -0.41
CCL1P22362 AC009955.4-201ENST00000597192 544 ntBASIC12.48□□□□□ -0.41
CCL1P22362 MIR6720-201ENST00000611664 98 ntBASIC12.48□□□□□ -0.41
CCL1P22362 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.48□□□□□ -0.41
CCL1P22362 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
CCL1P22362 AL358472.5-202ENST00000641448 1267 ntBASIC12.48□□□□□ -0.41
CCL1P22362 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL1P22362 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.47□□□□□ -0.41
CCL1P22362 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.47□□□□□ -0.41
CCL1P22362 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 IGHV3-72-202ENST00000621503 303 ntBASIC12.47□□□□□ -0.41
CCL1P22362 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms