Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NEBP20929 C2-211ENST00000469372 1906 ntTSL 2 BASIC5.09□□□□□ -1.59
NEBP20929 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC5.09□□□□□ -1.59
NEBP20929 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEBP20929 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEBP20929 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEBP20929 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
NEBP20929 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NEBP20929 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
NEBP20929 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC5.09□□□□□ -1.59
NEBP20929 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEBP20929 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 AL353662.2-201ENST00000372214 645 ntBASIC5.09□□□□□ -1.59
NEBP20929 CYTOR-208ENST00000419680 675 ntTSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 ACTG1P21-201ENST00000431536 1000 ntBASIC5.09□□□□□ -1.59
NEBP20929 AL596087.2-201ENST00000451784 484 ntTSL 3 BASIC5.09□□□□□ -1.59
NEBP20929 HNRNPA1P4-201ENST00000509706 756 ntBASIC5.09□□□□□ -1.59
NEBP20929 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEBP20929 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC5.09□□□□□ -1.59
NEBP20929 BX255925.2-201ENST00000605600 515 ntBASIC5.09□□□□□ -1.59
NEBP20929 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 AC015909.5-201ENST00000624336 2266 ntBASIC5.09□□□□□ -1.59
NEBP20929 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NEBP20929 PSMC1P1-201ENST00000478110 1320 ntBASIC5.09□□□□□ -1.59
NEBP20929 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC5.09□□□□□ -1.6
NEBP20929 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 GPHA2-201ENST00000279168 747 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.6
NEBP20929 RN7SKP194-201ENST00000411328 351 ntBASIC5.09□□□□□ -1.6
NEBP20929 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC5.09□□□□□ -1.6
NEBP20929 AC067960.1-201ENST00000441053 812 ntTSL 3 BASIC5.09□□□□□ -1.6
NEBP20929 NXF1-208ENST00000531131 1023 ntTSL 2 BASIC5.09□□□□□ -1.6
NEBP20929 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC5.09□□□□□ -1.6
NEBP20929 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC5.09□□□□□ -1.6
NEBP20929 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC5.09□□□□□ -1.6
NEBP20929 AC006111.1-201ENST00000573982 329 ntTSL 3 BASIC5.09□□□□□ -1.6
NEBP20929 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC5.09□□□□□ -1.6
NEBP20929 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC5.09□□□□□ -1.6
NEBP20929 MVK-217ENST00000639206 367 ntTSL 5 BASIC5.09□□□□□ -1.6
NEBP20929 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
NEBP20929 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
NEBP20929 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
NEBP20929 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC5.09□□□□□ -1.6
NEBP20929 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NEBP20929 LRTOMT-205ENST00000423494 1270 ntTSL 2 BASIC5.08□□□□□ -1.6
NEBP20929 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 AC006970.1-201ENST00000442064 389 ntBASIC5.08□□□□□ -1.6
NEBP20929 COQ5-202ENST00000445328 992 ntTSL 2 BASIC5.08□□□□□ -1.6
NEBP20929 RBMX2P3-201ENST00000450122 957 ntBASIC5.08□□□□□ -1.6
NEBP20929 RPS18-233ENST00000474973 589 ntTSL 2 BASIC5.08□□□□□ -1.6
NEBP20929 RN7SL16P-201ENST00000476316 269 ntBASIC5.08□□□□□ -1.6
NEBP20929 MEOX1-204ENST00000549132 1152 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 ANKRD20A2-203ENST00000611747 520 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 ANKRD20A4-203ENST00000615302 520 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 AC010618.3-204ENST00000615939 751 ntBASIC5.08□□□□□ -1.6
NEBP20929 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC5.08□□□□□ -1.6
NEBP20929 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 RN7SKP170-201ENST00000362550 328 ntBASIC5.08□□□□□ -1.6
NEBP20929 LSP1P2-201ENST00000479042 133 ntBASIC5.08□□□□□ -1.6
NEBP20929 BOD1P2-201ENST00000578494 481 ntBASIC5.08□□□□□ -1.6
NEBP20929 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NEBP20929 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NEBP20929 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NEBP20929 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NEBP20929 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC5.08□□□□□ -1.6
NEBP20929 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
NEBP20929 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NEBP20929 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NEBP20929 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEBP20929 KRT8P46-201ENST00000512037 1426 ntBASIC5.08□□□□□ -1.6
NEBP20929 KANK1P1-201ENST00000400619 1234 ntBASIC5.08□□□□□ -1.6
NEBP20929 SMIM10L2B-AS1-201ENST00000453528 1027 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms